Accelerate your data analysis with our open access software. Our software is freely available for downloading at your convenience.
![180828 aiw002-02 ipsc p4 p8 day4.tif](https://static.wixstatic.com/media/1bf58f_e2dbf9b11f4f402e884600822df714f1~mv2.png/v1/fill/w_326,h_245,al_c,q_85,usm_0.66_1.00_0.01,enc_auto/1bf58f_e2dbf9b11f4f402e884600822df714f1~mv2.png)
OrgM
A Fiji macro for measuring organoid area and size. Click below for more information on how to use orgM, or click here to visit our GitHub and get started.
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![](https://static.wixstatic.com/media/1bf58f_e29da14eff4f48f6a2797a3b703ff832~mv2.jpg/v1/fill/w_327,h_351,al_c,q_80,usm_0.66_1.00_0.01,enc_auto/1bf58f_e29da14eff4f48f6a2797a3b703ff832~mv2.jpg)
CellQ
Image J python / jython macro to analyze 2D cell cultures counting cell density and positive cells for markers of interest.
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Read the publication by Carol X. -Q. Chen et al. using CellQ
Auto-qPCR
A program to automatically process qPCR data from csv files in any PCR machine. To create a normalized data table of RNA/DNA quantities, statistics, and bar charts.
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Read the publication by Gilles Maussion et al. using Auto-qPCR here.
HistQ
A Fiji (ImageJ) macro written in jython for automated batch analysis of histology sections.
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Read the publication by Omid Tavassoly et al. using HistQ
here.
![180906 aiw002-02 ipsc day2 b.tif](https://static.wixstatic.com/media/1bf58f_6bc9085ba1274280b331d2cdecf8eda4~mv2.png/v1/fill/w_326,h_245,al_c,q_85,usm_0.66_1.00_0.01,enc_auto/1bf58f_6bc9085ba1274280b331d2cdecf8eda4~mv2.png)
OrgQ
A Fiji macro written in jython to analysis IF images of cryosection from organoid tissues.
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Read the publication by Nguyen-Vi Mohammed et al. using OrgQ here.
![180906 aiw002-02 ipsc day.tif](https://static.wixstatic.com/media/1bf58f_a7cac56c68d342b9ae79783b59920a79~mv2.png/v1/fill/w_327,h_245,al_c,q_85,usm_0.66_1.00_0.01,enc_auto/1bf58f_a7cac56c68d342b9ae79783b59920a79~mv2.png)